Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023988.1 Corchorus olitorius cultivar O-4 contig24021, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32022

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--50
2
23.5
2
100
0
94
0
51
0
48
1.00
4782--4829
11
4.3
11
86
2
69
79
16
4
0
0.89
4782--4827
22
2.1
22
95
0
83
80
15
4
0
0.86
4782--4829
6
8.5
6
80
13
57
79
16
4
0
0.89
12129--12315
58
3.3
56
84
8
245
54
4
17
24
1.62
12293--12625
22
15.5
22
80
12
247
55
5
24
15
1.61
12293--12378
12
7.7
12
65
15
58
55
4
26
12
1.56
12293--12636
44
8.0
44
76
14
276
55
5
23
15
1.61
12296--12625
66
5.1
66
76
13
337
55
5
23
15
1.61
12246--12594
169
2.1
168
93
1
592
53
5
23
17
1.64
14399--14424
2
13.0
2
100
0
52
0
50
0
50
1.00
14631--14673
21
2.1
20
82
4
50
67
9
11
11
1.42
17790--17830
22
2.0
20
85
9
55
53
2
9
34
1.47
20723--20796
28
2.6
28
89
0
103
17
16
25
40
1.90
25987--26025
2
19.5
2
100
0
78
0
51
0
48
1.00

Tables:   1

The End!