Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023993.1 Corchorus olitorius cultivar O-4 contig24026, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16567

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2437--2466
15
2.0
15
93
0
51
23
13
10
53
1.69
4965--5064
30
3.3
30
94
1
173
43
9
37
11
1.72
6045--6079
1
35.0
1
88
0
52
0
5
0
94
0.32
6042--6079
11
3.2
12
92
7
60
0
7
0
92
0.40
8284--8347
19
3.5
19
75
12
80
31
12
18
37
1.88
8286--8358
35
2.1
35
94
0
128
31
13
16
38
1.88
10321--10365
22
2.2
19
84
11
54
42
11
26
20
1.85
12080--12113
9
3.7
9
92
4
50
32
0
0
67
0.91
12630--12675
10
4.6
10
94
0
83
36
21
10
30
1.88
14219--14295
22
3.5
22
82
1
84
41
14
7
36
1.75
14215--14315
43
2.3
44
84
1
123
40
14
8
35
1.78

Tables:   1

The End!