Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023997.1 Corchorus olitorius cultivar O-4 contig24030, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9756

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2713--2771
31
1.9
31
100
0
118
28
20
23
27
1.99
2959--3031
6
12.8
6
81
9
73
78
0
21
0
0.76
2965--3027
17
3.6
17
82
8
83
74
0
25
0
0.82
2960--3031
23
3.2
22
79
11
67
77
0
22
0
0.76
3021--3069
25
2.0
25
83
0
62
73
0
12
14
1.10
5701--5755
15
3.7
15
74
13
51
20
38
16
25
1.92
8714--8803
6
15.8
6
85
6
82
77
0
22
0
0.76
8716--8802
5
15.8
5
82
13
84
77
0
22
0
0.78
8714--8802
23
4.0
22
83
9
108
77
0
22
0
0.77
8875--8931
28
2.0
28
82
0
69
35
14
17
33
1.90

Tables:   1

The End!