Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024007.1 Corchorus olitorius cultivar O-4 contig24040, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5794

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63--104
15
2.7
15
92
3
66
64
14
9
11
1.50
1435--1504
20
3.5
20
98
0
131
30
28
4
37
1.76
2488--2520
15
2.1
16
88
5
50
39
12
0
48
1.40
3025--3054
15
2.1
15
93
6
53
63
6
16
13
1.50
3409--3460
21
2.5
21
90
0
77
15
21
46
17
1.84

Tables:   1

The End!