Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024012.1 Corchorus olitorius cultivar O-4 contig24045, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27062

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4622--4659
15
2.4
16
91
4
60
71
13
2
13
1.26
7985--8041
30
1.9
30
85
7
80
28
19
8
43
1.80
9599--9902
63
4.9
63
82
4
359
38
15
20
25
1.92
10743--10801
29
2.0
29
90
0
91
28
27
3
40
1.72
16025--16087
29
2.2
29
94
0
108
31
20
6
41
1.77
16736--16765
5
6.0
5
92
0
51
3
36
0
60
1.14
20748--20800
26
2.0
26
82
7
63
50
1
1
45
1.23
27017--27055
2
19.5
2
100
0
78
48
0
0
51
1.00

Tables:   1

The End!