Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024021.1 Corchorus olitorius cultivar O-4 contig24054, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7329

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
336--591
124
2.1
124
89
2
390
28
9
15
46
1.77
654--876
113
2.0
112
88
2
331
28
5
21
44
1.74
2367--3092
381
1.9
382
96
0
1355
28
14
15
41
1.86
6307--6338
2
16.0
2
100
0
64
50
0
0
50
1.00
6958--7014
25
2.4
24
88
5
80
59
3
5
31
1.36
7132--7179
15
3.1
15
72
16
53
39
33
18
8
1.81
7130--7182
16
3.4
16
73
5
63
39
33
18
7
1.79

Tables:   1

The End!