Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024030.1 Corchorus olitorius cultivar O-4 contig24063, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8437

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
941--1096
80
2.0
80
90
1
251
33
11
31
23
1.90
4973--5048
29
2.5
31
83
8
113
18
23
19
38
1.93
4973--5047
30
2.6
28
85
6
105
18
22
20
38
1.93
5188--5264
29
2.6
30
91
2
129
38
16
28
15
1.90
6037--6165
66
2.0
64
92
5
217
27
15
18
37
1.91
6772--6847
26
2.9
27
72
2
73
25
14
18
42
1.88

Tables:   1

The End!