Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024034.1 Corchorus olitorius cultivar O-4 contig24067, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17219

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2926--2960
13
2.7
13
100
0
70
17
34
5
42
1.73
5837--5883
26
1.9
24
87
12
69
40
4
27
27
1.75
13449--13496
21
2.3
21
85
0
60
6
29
54
10
1.59
15462--15532
31
2.3
29
81
13
81
30
11
5
52
1.60
15533--15575
15
2.9
15
78
0
50
74
18
2
4
1.10
15534--15574
22
1.9
22
90
5
66
75
17
2
4
1.08
16832--16873
15
2.7
15
88
3
57
61
14
9
14
1.55

Tables:   1

The End!