Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024050.1 Corchorus olitorius cultivar O-4 contig24083, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15287

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1501--1549
6
7.7
6
84
11
62
79
14
2
4
0.97
1493--1549
20
2.8
20
86
7
71
78
15
1
3
0.96
1493--1550
26
2.2
27
81
12
75
77
17
1
3
0.99
2938--2966
14
2.1
14
100
0
58
41
13
0
44
1.44
5724--5774
23
2.2
23
79
6
59
62
0
1
35
1.06
8905--8930
12
2.2
12
100
0
52
42
7
15
34
1.75
12597--12921
76
4.2
77
81
13
386
33
18
16
31
1.93
12597--12964
76
4.8
76
78
15
380
32
17
16
32
1.93
12597--12964
154
2.4
154
94
2
641
32
17
16
32
1.93
12752--13026
43
6.8
43
80
12
225
31
16
16
35
1.91
13005--13076
30
2.4
31
76
6
76
33
6
11
48
1.65
14651--14691
21
1.9
22
85
5
57
31
29
14
24
1.95

Tables:   1

The End!