Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024059.1 Corchorus olitorius cultivar O-4 contig24092, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9114

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1141--1197
30
1.9
30
85
0
78
43
10
19
26
1.83
4056--4097
21
2.0
22
90
4
68
23
30
11
33
1.91
6597--6661
26
2.6
24
81
13
87
66
13
1
18
1.33
7258--7407
50
3.0
50
93
0
255
33
15
12
38
1.85
7854--8003
79
1.9
79
97
0
282
30
20
14
35
1.91
8076--8244
50
3.4
50
97
0
311
31
29
13
26
1.93
8272--8528
50
5.1
50
96
0
451
33
11
27
27
1.92
8795--8874
29
2.9
28
81
10
101
23
12
22
41
1.88

Tables:   1

The End!