Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024061.1 Corchorus olitorius cultivar O-4 contig24094, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27676

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2448--2499
15
3.5
15
94
0
86
42
15
25
17
1.88
14243--14652
125
3.3
124
87
3
583
35
17
17
30
1.93
14547--14724
94
1.9
93
96
1
329
35
18
16
29
1.93
14793--14917
32
3.8
32
80
6
97
26
24
24
25
2.00
14794--14887
34
2.8
33
81
7
109
24
23
24
27
2.00
14811--14921
32
3.4
33
80
5
100
23
22
26
27
1.99
17798--17894
51
1.9
51
85
8
135
26
12
5
55
1.57
21605--21665
29
2.1
29
93
0
104
55
6
9
27
1.57
25889--26329
54
8.2
53
83
6
437
30
21
19
28
1.97
26295--26810
35
14.4
35
88
4
642
41
18
13
26
1.87
26828--27027
54
3.7
53
84
5
251
36
21
16
26
1.94
26830--27027
106
1.9
107
89
4
310
35
21
15
26
1.94
26995--27105
39
2.8
39
94
0
204
27
26
21
24
1.99

Tables:   1

The End!