Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024062.1 Corchorus olitorius cultivar O-4 contig24095, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18343

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--353
54
6.6
54
82
2
311
31
23
18
26
1.98
47--350
162
1.9
162
81
2
378
31
23
19
26
1.98
1--350
108
3.2
108
81
4
395
31
24
18
26
1.98
319--582
35
7.4
35
90
2
348
41
18
13
26
1.88
1979--2033
26
2.2
25
83
3
65
9
16
0
74
1.06
10270--10309
15
2.6
15
88
4
53
15
7
10
67
1.41
10283--10311
15
1.9
15
100
0
58
13
6
6
72
1.26
10829--11183
183
1.9
182
96
0
656
41
17
16
24
1.90
13264--13296
9
3.7
9
95
0
57
24
0
39
36
1.56
15368--15453
42
2.0
42
97
0
163
37
17
11
33
1.86

Tables:   1

The End!