Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024076.1 Corchorus olitorius cultivar O-4 contig24109, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19126

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
338--383
22
2.1
22
100
0
92
15
21
6
56
1.61
512--547
18
2.1
18
89
5
56
38
11
5
44
1.63
1164--1207
20
2.2
20
84
8
54
61
11
2
25
1.41
2243--2304
32
1.9
32
83
6
81
30
24
12
32
1.93
6982--7025
20
2.2
20
95
0
79
6
6
34
52
1.55
9355--9390
19
1.9
18
88
5
54
27
22
8
41
1.82
14372--14414
21
2.1
21
91
4
70
32
18
25
23
1.97

Tables:   1

The End!