Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01002408.1 Corchorus olitorius cultivar O-4 contig02408, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1213

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
353--386
15
2.2
16
94
5
61
32
5
0
61
1.20
428--493
21
3.0
21
77
12
71
50
0
1
48
1.10
432--492
24
2.6
24
79
7
63
49
0
1
49
1.10
490--560
16
4.6
16
68
19
53
47
2
4
45
1.36
524--577
22
2.3
24
81
12
69
50
0
3
46
1.19
557--589
16
2.1
16
94
0
57
54
3
6
36
1.41
646--757
20
5.8
19
74
17
63
64
3
3
28
1.27
595--775
77
2.3
77
95
1
317
64
2
4
29
1.25
764--799
18
2.0
18
100
0
72
50
0
16
33
1.46
807--857
17
3.2
17
70
30
58
37
0
13
49
1.43
801--863
30
2.1
30
100
0
126
36
0
12
50
1.41

Tables:   1

The End!