Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024080.1 Corchorus olitorius cultivar O-4 contig24113, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10223

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1755--1792
11
3.5
11
92
0
58
50
7
34
7
1.61
2166--2257
21
4.4
21
90
2
132
27
28
16
28
1.97
5109--5682
30
19.1
30
91
1
857
45
19
13
20
1.84
5947--6453
36
14.1
36
83
4
589
41
18
20
19
1.90
5947--6453
73
7.1
71
83
6
576
41
18
20
19
1.90
7306--7351
20
2.4
19
82
7
56
6
23
0
69
1.11
8152--8176
13
1.9
13
100
0
50
0
16
4
80
0.87
8455--8488
2
17.5
2
93
6
61
52
0
0
47
1.00
8454--8488
17
2.1
17
100
0
70
54
0
0
45
0.99
8457--8486
15
2.0
15
100
0
60
53
0
0
46
1.00

Tables:   1

The End!