Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024084.1 Corchorus olitorius cultivar O-4 contig24117, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20922

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1719--1830
42
2.6
42
94
1
188
34
12
22
30
1.91
2006--2045
21
2.0
20
85
5
53
50
10
15
25
1.74
2000--2185
22
8.5
22
77
8
60
40
9
13
36
1.76
2037--2184
44
3.4
43
83
5
165
37
8
13
39
1.76
2037--2184
22
6.8
22
78
11
144
37
8
13
39
1.76
4142--4177
17
2.1
17
100
0
72
27
27
5
38
1.79
9678--9770
43
2.2
43
92
5
154
27
19
24
27
1.99
9678--9770
21
4.4
21
93
5
152
27
19
24
27
1.99
10645--10691
26
1.9
23
87
12
67
25
27
4
42
1.73
15443--15513
21
3.4
20
84
7
97
26
18
25
29
1.98

Tables:   1

The End!