Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024087.1 Corchorus olitorius cultivar O-4 contig24120, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38955

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3606--3640
2
17.5
2
93
0
61
0
0
45
54
0.99
3713--4026
43
7.5
42
74
10
266
22
9
27
39
1.86
3713--4020
84
3.7
84
85
3
388
23
10
27
39
1.86
8334--8369
19
1.9
18
88
5
54
41
2
22
33
1.68
9899--9926
6
4.7
6
100
0
56
0
17
0
82
0.68
31385--31591
103
2.0
103
98
0
396
35
19
15
29
1.93

Tables:   1

The End!