Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024097.1 Corchorus olitorius cultivar O-4 contig24130, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15278

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3766--3932
8
21.2
8
68
19
68
63
0
11
24
1.31
5679--5713
18
2.0
17
88
5
52
31
5
14
48
1.67
7264--7310
25
1.9
24
95
4
85
55
8
6
29
1.55
7301--7382
39
2.0
41
86
4
114
37
3
7
51
1.48
7598--7640
2
21.0
2
90
4
68
48
2
2
46
1.27
9475--9546
13
5.5
13
81
6
74
76
0
20
2
0.91
9475--9554
26
3.1
26
77
13
85
76
0
21
2
0.91
9522--9553
16
1.9
17
93
6
57
75
0
25
0
0.81
9494--9550
27
2.3
26
85
11
75
75
0
22
1
0.90

Tables:   1

The End!