Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024106.1 Corchorus olitorius cultivar O-4 contig24139, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4191

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
384--432
8
6.0
8
78
4
53
46
6
20
26
1.73
426--1475
36
29.5
35
78
5
872
40
23
19
16
1.91
468--1475
107
9.4
107
75
8
535
40
23
19
16
1.91
426--1475
71
14.7
70
78
4
872
40
23
19
16
1.91
3206--3238
14
2.4
14
90
5
50
33
9
12
45
1.73

Tables:   1

The End!