Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024109.1 Corchorus olitorius cultivar O-4 contig24142, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34369

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1235--1337
41
2.5
41
87
0
134
24
14
13
47
1.80
1246--1354
41
2.7
41
80
4
123
23
12
12
50
1.75
2483--2530
24
2.0
25
87
4
71
75
2
6
16
1.11
4320--4387
20
3.4
20
95
0
118
26
17
22
33
1.96
9525--9715
75
2.6
75
86
4
253
36
9
14
39
1.79
14107--14142
18
1.9
19
88
5
56
30
22
8
38
1.83
15297--15346
22
2.3
22
85
0
64
42
12
4
42
1.60
16451--16482
17
1.9
17
93
6
57
12
37
31
18
1.88

Tables:   1

The End!