Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024113.1 Corchorus olitorius cultivar O-4 contig24146, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26774

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6759--6784
13
2.0
13
100
0
52
15
0
30
53
1.42
8527--8630
51
2.1
50
80
12
115
23
22
12
42
1.87
13681--13714
14
2.4
14
95
0
59
23
8
0
67
1.18
15118--15150
2
17.0
2
90
6
50
51
0
3
45
1.16
16754--16807
18
3.1
17
82
12
56
68
0
29
1
1.00
17061--17173
56
2.0
56
87
3
165
35
21
15
28
1.93
17678--17995
162
2.0
161
87
1
458
33
11
21
33
1.89
21395--21456
3
20.7
3
93
6
108
32
0
0
67
0.91
22992--23022
15
2.1
15
93
0
53
41
25
9
22
1.84

Tables:   1

The End!