Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024116.1 Corchorus olitorius cultivar O-4 contig24149, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26161

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2948--2981
17
1.9
18
88
5
52
2
0
14
82
0.79
11502--11868
183
2.0
183
98
0
716
21
16
25
37
1.93
12628--12714
28
3.1
28
98
0
165
56
6
13
22
1.61
12637--12716
16
5.5
16
62
22
50
56
6
13
23
1.60
13034--13061
14
2.0
14
100
0
56
42
21
14
21
1.88
13057--13098
11
3.8
11
100
0
84
9
19
35
35
1.84
13194--13225
16
2.0
16
100
0
64
62
6
0
31
1.20
15261--15297
12
3.1
12
100
0
74
32
43
8
16
1.77
16396--16450
26
2.1
27
89
3
85
29
16
9
45
1.78

Tables:   1

The End!