Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024122.1 Corchorus olitorius cultivar O-4 contig24155, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19479

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
408--484
28
2.7
29
82
9
88
31
18
12
37
1.88
984--1068
37
2.3
37
91
0
134
36
3
7
52
1.46
6430--6463
13
2.6
13
90
0
50
20
5
0
73
1.04
7313--7350
16
2.3
16
86
13
51
81
0
10
7
0.87
11251--11292
20
2.1
20
91
8
68
50
4
14
30
1.63
14742--14862
61
2.0
62
81
1
145
25
19
7
47
1.76

Tables:   1

The End!