Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024123.1 Corchorus olitorius cultivar O-4 contig24156, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6829

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2739--2799
14
4.4
14
75
4
52
50
11
6
31
1.64
2742--2796
28
2.0
28
88
0
83
45
12
7
34
1.70
3443--3516
4
18.8
4
76
15
66
77
1
20
1
0.92
4620--5109
37
13.2
37
77
2
453
24
18
13
43
1.86
4580--5111
74
7.2
74
89
3
775
24
18
13
43
1.86
4580--5111
149
3.6
148
88
3
775
24
18
13
43
1.86
5206--5472
54
4.8
54
85
6
329
27
15
21
35
1.93
5576--5653
33
2.4
33
91
0
120
43
17
6
32
1.75
5811--5888
7
10.9
7
94
4
129
58
25
0
15
1.37
5819--5888
22
3.2
22
97
2
133
60
27
0
12
1.33
5948--6014
27
2.5
28
87
4
93
41
17
7
32
1.78

Tables:   1

The End!