Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024125.1 Corchorus olitorius cultivar O-4 contig24158, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10802

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
758--869
36
3.4
36
67
27
111
25
23
13
38
1.91
714--1290
58
9.7
58
85
3
550
24
22
14
38
1.91
2022--2058
3
12.3
3
100
0
74
67
0
0
32
0.91
7038--7102
34
1.9
34
96
0
121
27
33
26
12
1.92
7923--8237
39
7.6
39
77
11
219
36
16
14
32
1.89
7955--8237
39
6.9
38
81
10
262
37
15
14
32
1.88
7923--8238
119
2.6
120
84
11
383
36
16
14
31
1.89
7969--8234
44
6.5
42
78
14
188
36
15
14
33
1.88
10595--10662
30
2.3
30
87
5
93
16
10
23
50
1.75

Tables:   1

The End!