Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024128.1 Corchorus olitorius cultivar O-4 contig24161, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11539

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
785--819
11
3.2
11
91
0
61
0
2
17
80
0.84
3289--3329
20
2.0
20
100
0
82
39
9
14
36
1.79
4079--4118
21
2.1
19
86
13
55
20
27
15
37
1.92
6441--6492
12
4.3
12
73
9
52
65
7
25
1
1.30
6451--6499
24
2.0
24
92
0
80
67
4
24
4
1.26
7395--7427
15
2.1
16
88
5
50
81
0
18
0
0.68
7845--8088
43
5.8
41
82
7
269
42
27
10
20
1.84
7844--8088
41
5.8
42
83
7
293
42
26
10
20
1.83
7845--8088
84
2.9
84
92
3
418
42
27
10
20
1.84
8198--8235
2
19.5
2
89
5
60
47
2
0
50
1.15

Tables:   1

The End!