Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024132.1 Corchorus olitorius cultivar O-4 contig24165, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30765

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2744--2775
12
2.5
13
90
10
57
75
12
6
6
1.19
3353--3392
15
2.6
16
88
4
55
62
12
10
15
1.54
6675--6744
34
2.1
34
100
0
140
34
34
22
8
1.85
15169--15463
116
2.5
117
88
8
408
26
17
23
32
1.97
15278--15499
76
3.0
74
86
5
304
26
18
22
32
1.97
17449--17487
20
1.9
21
89
5
62
41
10
10
38
1.73
19475--19529
24
2.3
24
83
0
65
18
12
21
47
1.82
19545--19638
49
2.0
49
87
4
138
18
28
14
38
1.90
19674--19718
20
2.4
19
85
7
56
22
15
20
42
1.89

Tables:   1

The End!