Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024134.1 Corchorus olitorius cultivar O-4 contig24167, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13578

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1878--1934
30
1.9
30
85
0
78
43
10
19
26
1.83
2512--2541
15
1.9
16
93
6
53
63
10
6
20
1.47
2616--2718
42
2.5
42
100
0
206
30
13
17
38
1.88
2998--3028
11
2.8
11
90
0
53
35
22
9
32
1.87
3021--3060
13
3.1
13
85
0
53
25
15
15
45
1.84
3369--3417
22
2.3
20
80
19
55
32
18
4
44
1.68

Tables:   1

The End!