Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024137.1 Corchorus olitorius cultivar O-4 contig24170, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27543

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
911--946
2
18.0
2
100
0
72
50
0
0
50
1.00
9054--9159
38
2.8
38
91
1
160
33
6
15
44
1.72
21038--21102
9
6.9
9
81
11
69
84
12
3
0
0.73
21039--21102
10
6.5
10
77
16
71
85
10
3
0
0.69
21039--21076
12
3.3
12
89
7
53
84
10
5
0
0.77
21058--21102
19
2.5
17
89
10
72
86
13
0
0
0.57
21038--21102
18
3.4
18
84
15
87
84
12
3
0
0.73
21100--21141
19
2.2
20
86
4
59
54
0
21
23
1.44
22319--23024
146
4.9
145
85
6
907
29
20
15
34
1.93
23156--23544
40
10.0
40
81
5
386
29
20
10
40
1.85
23068--23544
120
4.1
118
78
5
459
29
19
10
40
1.85
23564--23696
40
3.3
39
80
8
142
29
17
12
41
1.85
25590--25653
24
2.7
23
83
9
67
68
3
17
10
1.31
26761--26808
11
4.7
11
80
12
50
39
10
20
29
1.86

Tables:   1

The End!