Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024145.1 Corchorus olitorius cultivar O-4 contig24178, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4433

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
254--455
29
7.0
29
89
2
271
39
24
20
16
1.92
2148--2242
46
2.1
45
82
5
111
26
17
3
52
1.60
2999--3036
15
2.4
16
82
8
51
5
42
0
52
1.24
3910--3989
27
2.9
27
84
1
79
25
15
18
41
1.89
3927--3989
27
2.3
27
91
0
99
22
14
23
39
1.91
3927--3997
27
2.6
27
88
0
88
21
15
23
39
1.91

Tables:   1

The End!