Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024152.1 Corchorus olitorius cultivar O-4 contig24185, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9670

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--202
107
1.9
104
95
3
368
43
21
10
23
1.84
965--1015
19
2.9
17
83
11
66
43
19
17
19
1.89
1472--1498
11
2.5
11
100
0
54
14
18
7
59
1.58
3245--3501
123
2.0
129
88
7
391
50
1
9
38
1.43
3600--3634
17
2.2
15
90
10
52
48
0
17
34
1.47
6825--6854
15
2.0
15
100
0
60
33
13
20
33
1.91
8269--8303
2
17.5
2
87
0
52
48
0
5
45
1.26
9398--9524
45
2.8
46
93
3
222
38
22
6
33
1.79

Tables:   1

The End!