Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024156.1 Corchorus olitorius cultivar O-4 contig24189, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6536

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5711--5804
27
3.5
26
76
13
84
30
19
0
50
1.48
5738--5824
28
3.1
27
75
6
77
28
18
2
50
1.59
5711--5824
55
2.1
55
83
6
142
28
19
1
50
1.58
6097--6259
54
3.0
53
82
11
188
28
16
1
53
1.53
6101--6259
18
8.7
18
77
13
139
28
16
1
53
1.53
6248--6332
27
3.5
26
72
24
94
29
21
0
49
1.50
6275--6391
19
5.6
19
69
21
83
30
16
0
52
1.50
6239--6447
46
4.7
45
80
12
229
27
18
0
53
1.48
6324--6391
20
3.5
20
73
4
66
33
14
1
50
1.53
6356--6401
21
2.2
21
84
7
58
28
17
0
54
1.43

Tables:   1

The End!