Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024159.1 Corchorus olitorius cultivar O-4 contig24192, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23036

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11916--12053
59
2.3
59
88
2
215
34
23
11
30
1.91
12377--12486
54
2.0
54
100
0
220
27
26
12
33
1.93
22065--22095
8
3.8
8
91
8
53
87
0
0
12
0.55
22669--22889
107
2.1
107
97
0
415
25
19
15
39
1.91

Tables:   1

The End!