Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024162.1 Corchorus olitorius cultivar O-4 contig24195, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6497

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
245--316
16
4.5
17
76
11
71
6
13
36
43
1.72
329--369
16
2.5
17
76
15
50
4
14
36
43
1.67
1678--1718
21
2.0
21
90
0
64
34
21
9
34
1.87
2091--2128
19
2.0
19
89
0
58
26
21
26
26
1.99
3565--3589
11
2.3
11
100
0
50
48
16
0
36
1.46
4258--4359
16
6.4
16
72
2
80
6
15
38
39
1.74
4262--4352
32
2.8
32
84
0
128
7
16
36
39
1.77
4530--4586
5
11.8
5
72
20
50
56
3
0
40
1.17
4530--4586
13
3.9
14
78
17
71
56
3
0
40
1.17
4530--4586
22
2.6
23
77
8
73
56
3
0
40
1.17
5384--5427
16
2.8
16
82
0
61
11
11
38
38
1.77

Tables:   1

The End!