Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024165.1 Corchorus olitorius cultivar O-4 contig24198, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9504

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3390--3444
21
2.6
21
88
0
74
16
49
21
12
1.79
5288--5347
29
2.0
30
83
6
77
36
8
18
36
1.81
6726--6755
15
2.0
15
93
0
51
20
10
13
56
1.65
8031--8166
16
8.6
16
80
7
152
7
16
38
37
1.76
8045--8166
32
3.8
33
88
4
169
7
14
39
38
1.74
8323--8369
13
3.8
12
78
13
51
55
4
0
40
1.19
8768--9049
140
2.0
140
95
0
510
31
11
11
44
1.77

Tables:   1

The End!