Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024167.1 Corchorus olitorius cultivar O-4 contig24200, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3877

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1725--1765
20
2.0
20
90
0
64
36
24
12
26
1.91
2256--2329
28
2.7
26
81
10
76
37
33
10
17
1.85
2520--2580
17
3.3
18
75
11
61
1
24
0
73
0.92
2663--2781
47
2.5
46
84
8
150
39
21
21
16
1.92
2892--3167
68
4.0
68
86
1
356
27
18
28
24
1.98
2892--3167
137
2.0
136
84
2
356
27
18
28
24
1.98
3334--3375
15
2.7
15
88
3
66
64
14
9
11
1.50

Tables:   1

The End!