Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024168.1 Corchorus olitorius cultivar O-4 contig24201, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12269

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
625--1002
69
5.4
69
87
7
512
26
16
29
26
1.97
960--1246
50
5.8
50
92
0
468
29
13
27
30
1.94
957--1246
99
2.9
100
91
1
483
29
13
26
30
1.94
960--1231
149
1.8
149
94
0
481
28
12
27
30
1.93
2535--2570
6
6.5
6
90
9
51
16
0
11
72
1.12
2535--2595
10
5.9
10
82
7
52
14
1
8
75
1.11
2582--2630
19
2.6
19
81
9
64
12
4
4
79
1.01
7332--7383
22
2.4
22
80
0
59
5
26
48
19
1.71

Tables:   1

The End!