Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024174.1 Corchorus olitorius cultivar O-4 contig24207, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37381

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5694--5822
49
2.7
47
84
5
159
26
17
4
51
1.64
6622--6658
15
2.5
15
90
0
56
40
13
27
18
1.88
12678--12715
18
2.2
18
90
4
60
44
2
23
28
1.67
13990--14120
49
2.7
48
85
4
165
25
17
4
52
1.63
15147--15211
2
33.0
2
78
9
62
46
6
1
46
1.37
19357--19409
11
5.2
10
78
17
56
39
18
1
39
1.62
19357--19410
19
2.6
21
77
19
60
40
18
1
38
1.61
30892--30945
19
2.6
21
77
19
60
38
18
3
38
1.69

Tables:   1

The End!