Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024175.1 Corchorus olitorius cultivar O-4 contig24208, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18101

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7254--7284
2
15.5
2
100
0
62
51
0
0
48
1.00
12329--12368
6
6.8
6
82
5
55
82
0
15
2
0.77
12330--12367
11
3.4
11
86
13
51
81
0
15
2
0.80
12813--12844
12
2.8
12
90
9
50
6
0
6
87
0.67
14205--14880
162
4.2
164
89
3
1012
30
19
19
29
1.97
14216--14880
327
2.0
322
90
2
1046
30
19
19
30
1.97
15416--15459
23
2.0
20
83
12
52
13
6
20
59
1.57

Tables:   1

The End!