Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024185.1 Corchorus olitorius cultivar O-4 contig24218, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25185

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1415--1585
22
7.8
22
71
18
108
38
13
9
39
1.77
1415--1566
43
3.4
43
77
13
116
38
13
9
38
1.77
1804--1831
6
4.7
6
100
0
56
50
14
0
35
1.43
3762--3822
27
2.3
26
83
16
72
45
3
3
47
1.35
12563--12603
2
21.0
2
85
5
57
0
53
0
46
1.00
16290--16327
11
3.5
11
85
10
51
57
2
0
39
1.12
17423--17478
30
1.9
29
89
7
87
62
10
8
17
1.52
21263--22287
437
2.3
434
84
4
1286
31
14
11
43
1.81
24789--24813
7
3.6
7
100
0
50
40
12
32
16
1.84

Tables:   1

The End!