Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024191.1 Corchorus olitorius cultivar O-4 contig24224, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17986

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
435--461
13
2.1
13
100
0
54
55
14
0
29
1.40
448--553
53
2.0
53
100
0
212
50
18
7
22
1.72
2349--2383
14
2.5
14
100
0
70
0
5
5
88
0.63
5440--5486
2
23.0
2
91
4
76
46
4
0
48
1.21
10945--10986
21
2.0
21
86
9
59
16
0
35
47
1.47
10983--11031
25
2.0
25
100
0
98
34
20
32
12
1.90
16434--16458
13
1.9
13
100
0
50
64
32
4
0
1.12
17126--17182
29
2.0
28
82
3
69
28
14
14
43
1.83
17306--17402
31
3.1
31
95
1
167
42
11
14
31
1.81

Tables:   1

The End!