Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024200.1 Corchorus olitorius cultivar O-4 contig24233, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9569

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
385--431
20
2.3
20
79
10
60
82
0
12
4
0.80
824--856
5
6.8
5
89
3
50
81
15
0
3
0.80
1494--1643
50
3.0
50
90
0
228
32
18
15
34
1.92
2302--2670
50
7.4
50
93
1
616
30
27
13
27
1.94
3068--3168
27
3.7
27
85
1
103
20
14
25
38
1.91
5274--5329
4
14.0
4
92
0
58
51
8
39
0
1.33
5459--5501
18
2.4
18
88
0
59
69
0
27
2
1.00
5470--5501
12
2.6
13
85
14
50
75
0
25
0
0.81

Tables:   1

The End!