Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024205.1 Corchorus olitorius cultivar O-4 contig24238, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22391

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9019--9068
2
25.0
2
100
0
100
0
0
50
50
1.00
17957--18062
47
2.2
47
96
3
194
31
7
16
44
1.76
18658--18711
12
4.7
12
86
9
67
81
18
0
0
0.69
18648--18711
8
7.9
8
84
8
67
84
15
0
0
0.63
20925--20991
31
2.2
31
89
5
102
47
10
19
22
1.79
21123--21201
31
2.5
31
95
0
140
34
16
12
36
1.87
21121--21257
60
2.2
62
83
2
161
30
15
14
39
1.87
21121--21257
31
4.5
29
85
3
130
30
15
14
39
1.87
22243--22382
31
4.6
31
78
5
133
39
12
16
32
1.85

Tables:   1

The End!