Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024208.1 Corchorus olitorius cultivar O-4 contig24241, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10287

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2114--2155
22
1.9
22
85
0
57
11
14
45
28
1.80
5298--5373
30
2.6
29
70
15
75
47
10
6
35
1.64
5703--5742
15
2.6
16
88
4
55
62
12
10
15
1.54
6527--6562
10
3.7
10
88
7
56
30
0
36
33
1.58
7507--7555
11
4.7
11
78
16
52
30
22
8
38
1.83
9833--9905
21
3.4
21
90
7
103
28
17
27
26
1.98
10022--10074
11
4.9
11
88
4
81
33
11
20
33
1.88
10022--10089
21
3.2
21
89
2
91
32
14
20
32
1.93

Tables:   1

The End!