Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024213.1 Corchorus olitorius cultivar O-4 contig24246, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8272

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
336--465
22
5.5
22
72
10
98
40
15
19
24
1.90
812--865
27
2.0
27
85
7
74
42
5
3
48
1.44
840--930
43
2.0
45
89
8
141
45
7
4
42
1.52
1813--1917
22
4.8
22
70
9
70
33
13
11
41
1.80
1976--2002
2
13.5
2
100
0
54
48
0
0
51
1.00
6218--6247
15
2.1
14
93
6
51
13
6
10
70
1.34

Tables:   1

The End!