Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024215.1 Corchorus olitorius cultivar O-4 contig24248, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10409

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1694--1747
23
2.4
23
84
6
76
38
20
22
18
1.93
1694--1761
23
3.0
21
79
12
73
42
19
23
14
1.88
2633--2676
22
2.0
22
86
0
61
20
0
9
70
1.14
3398--3437
20
2.1
19
85
4
53
52
5
10
32
1.56
6720--6758
13
3.0
13
92
0
60
15
0
28
56
1.40
7587--7678
21
4.4
21
95
2
159
28
18
27
26
1.98
8561--8607
26
1.9
24
87
12
69
27
27
4
40
1.75

Tables:   1

The End!