Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024222.1 Corchorus olitorius cultivar O-4 contig24255, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6521

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
528--1075
30
18.2
30
87
5
741
48
18
14
19
1.81
1208--1688
158
3.0
157
88
4
703
33
17
20
28
1.95
3151--3205
22
2.6
23
80
13
73
9
14
0
76
1.02
3167--3201
15
2.3
15
95
0
61
11
14
0
74
1.08
3161--3200
7
5.7
7
85
8
55
10
15
0
75
1.05
3530--3570
13
3.1
13
86
6
64
7
0
14
78
0.96
3511--3570
27
2.3
26
83
11
70
8
1
11
78
1.03
3493--3576
15
6.1
13
77
14
71
10
1
10
77
1.05

Tables:   1

The End!