Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024225.1 Corchorus olitorius cultivar O-4 contig24258, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27276

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2562--2591
16
1.9
16
93
6
53
36
3
13
46
1.60
18658--18699
21
1.9
23
85
9
61
30
14
11
42
1.81
22259--22379
22
5.6
22
73
12
90
33
14
9
42
1.77
24497--24578
22
3.7
22
76
9
69
37
14
12
35
1.84
24540--24811
22
12.7
21
70
14
164
33
15
9
41
1.80
24551--24703
82
1.9
83
83
4
202
32
15
9
42
1.80
24562--24788
66
3.5
65
71
16
184
34
14
8
42
1.76
25062--25188
22
5.8
23
74
16
94
34
19
8
37
1.83
25066--25406
66
5.0
66
73
13
242
35
19
8
36
1.82
25287--25406
22
5.5
22
76
13
104
34
19
10
36
1.85
25206--25406
44
4.5
43
74
10
120
35
18
8
37
1.81

Tables:   1

The End!