Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024230.1 Corchorus olitorius cultivar O-4 contig24263, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39513

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10453--10515
4
15.8
4
96
0
117
23
1
0
74
0.90
14002--14077
2
38.0
2
100
0
152
50
50
0
0
1.00
14263--14515
107
2.4
107
90
4
381
41
9
7
41
1.65
14789--15041
129
2.0
130
95
0
454
38
10
1
49
1.49
15600--15762
75
2.2
75
89
1
245
15
21
30
33
1.94
16117--16174
28
2.1
28
100
0
116
41
6
13
37
1.72
16117--16208
28
3.2
28
83
7
87
45
6
10
36
1.65
20793--20823
2
15.5
2
100
0
62
51
0
0
48
1.00
32103--32130
10
2.8
10
100
0
56
85
0
14
0
0.59
34636--34692
25
2.4
24
88
5
80
59
3
5
31
1.36
35431--35622
105
1.8
106
89
1
287
52
2
10
34
1.49
37658--37704
22
2.1
22
84
7
60
21
36
12
29
1.91

Tables:   1

The End!