Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01024235.1 Corchorus olitorius cultivar O-4 contig24268, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4485

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1627--1693
32
2.1
32
100
0
134
22
11
25
40
1.88
1826--1879
17
3.2
16
82
7
72
11
12
16
59
1.61
1868--1908
12
3.6
12
77
9
50
7
4
12
75
1.16
2921--2972
25
2.1
25
100
0
104
55
17
15
11
1.68
3609--4117
40
13.2
40
86
6
464
36
10
22
30
1.88
3703--4117
40
10.7
40
89
5
622
35
10
22
31
1.88
3774--4119
112
3.0
112
88
7
527
36
11
21
30
1.89
3731--4117
152
2.5
154
89
5
595
35
10
21
31
1.88

Tables:   1

The End!